config.py 17.4 KB
Newer Older
Monica Rainer's avatar
Monica Rainer committed
1
2
3
4
5
6
7
"""
Written by Avet Harutyunyan for the old GIANO pipeline
Implemented in the GIANOB DRS by Monica Rainer
"""

import os, tempfile, datetime
from collections import OrderedDict
Monica Rainer's avatar
Monica Rainer committed
8
from __version__ import __version__
Monica Rainer's avatar
Monica Rainer committed
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44


def getdate(date_time=None):
    tlimit = datetime.time(9, 0, 0)
    oneday = datetime.timedelta(days=1)
    if date_time:
        if isinstance(date_time, datetime.datetime):
            pass
        elif isinstance(date_time, basestring): 
            date_time = datetime.datetime.strptime(date_time, '%Y-%m-%dT%H:%M:%S.%f')
    else:
        date_time = datetime.datetime.utcnow()
    date_, time_ = date_time.date(), date_time.time()
    if time_ < tlimit:
        date_ = date_ - oneday
    return date_.strftime('%Y-%m-%d')


def read_usr_config(path):
    f = open(path, 'r')
    cntnt = f.readlines()
    f.close()
    usrconfig = {}
    for aline in cntnt:
        aline = aline.strip()
        #print aline
        if aline:
            if aline[0] != '#':
                key, value = aline.split(':::')
                #print key
                #print value
                usrconfig[key.strip()] = eval(value.strip())
    return usrconfig

usr_cfg_path = os.path.join(os.getcwd(), 'gofio.cfg')
if os.path.isfile(usr_cfg_path):
Monica Rainer's avatar
Monica Rainer committed
45
    #print 'qui'
Monica Rainer's avatar
Monica Rainer committed
46
47
48
49
50
    try:
        USRCONFIG = read_usr_config(usr_cfg_path)
    except:
        USRCONFIG = {}
        USRCONFIG['OFFLINE'] = False
Monica Rainer's avatar
Monica Rainer committed
51
    #print USRCONFIG
Monica Rainer's avatar
Monica Rainer committed
52
else:
Monica Rainer's avatar
Monica Rainer committed
53
    #print 'qui2'
Monica Rainer's avatar
Monica Rainer committed
54
55
    USRCONFIG ={}
    USRCONFIG['OFFLINE'] = False
Monica Rainer's avatar
Monica Rainer committed
56
#print USRCONFIG
Monica Rainer's avatar
Monica Rainer committed
57
58
59
60
61
62
63
64


#
# pipeline configuration
#

CONFIG = {}
CONFIG['APPNAME'] = 'GOFIO'
Monica Rainer's avatar
Monica Rainer committed
65
66
#CONFIG['VERSION'] = 1.0
CONFIG['VERSION'] = __version__
Monica Rainer's avatar
Monica Rainer committed
67
68
69
70
71
72
73
74
75
CONFIG['DATE'] = getdate()
CONFIG['OFFLINE'] = False

#
# Directories 
#

CONFIG['TMP_DIR'] = tempfile.gettempdir()
CONFIG['APP_DIR'] = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
76

Monica Rainer's avatar
Monica Rainer committed
77
#CONFIG['BASE_RAW'] = '/mnt/nfs/RAW'
Monica Rainer's avatar
Monica Rainer committed
78
CONFIG['BASE_RAW'] = '/Users/monica/Documents/GOFIO/gofio/raw'
Monica Rainer's avatar
Monica Rainer committed
79
80
CONFIG['BASE_RED_DIR'] = os.path.join(CONFIG['APP_DIR'],'reduced')
#CONFIG['BASE_RED_DIR'] = '/mnt/nfs/REDUCED'
Monica Rainer's avatar
Monica Rainer committed
81

82
83
84
CONFIG['BASE_RAMP'] = '/home/avet/gianorp/databases'


Monica Rainer's avatar
Monica Rainer committed
85
86
CONFIG['RAW_DIR'] = os.path.join(CONFIG['BASE_RAW'],CONFIG['DATE'])
CONFIG['RED_DIR'] = os.path.join(CONFIG['BASE_RED_DIR'],CONFIG['DATE'])
Monica Rainer's avatar
Monica Rainer committed
87
CONFIG['OFFLINE_DIR'] = False
Monica Rainer's avatar
Monica Rainer committed
88
89
90
91
92
93
94
CONFIG['RED_CALIB'] = os.path.join(CONFIG['RED_DIR'],'CALIB')
CONFIG['RED_STR'] = os.path.join(CONFIG['RED_DIR'],'STR')

# Resources

CONFIG['RES_DIR']      = os.path.join(CONFIG['APP_DIR'], 'resources')
CONFIG['BADPIX_MASK']  = os.path.join(CONFIG['RES_DIR'], 'badpix_mask.fits')
95
CONFIG['LOGGER'] = {'TERM':True,'FILE':True} # logger writes to terminal and/or to file
Monica Rainer's avatar
Monica Rainer committed
96
97
CONFIG['LOG_FILE'] = os.path.join(CONFIG['RED_DIR'], 'drs.log')
CONFIG['STRAIGHT'] = os.path.join(CONFIG['RES_DIR'],'straight_giano_2D')
98
99
CONFIG['STRAIGHT_OPT'] = ['I=1'] # the option DY is computed automatically
#CONFIG['STRAIGHT_OPT'] = ['I=1','DY=-5'] # define DY only if you want to override the automatic procedure
Monica Rainer's avatar
Monica Rainer committed
100
101
102
CONFIG['BASE_CALIB_DIR']    = os.path.join(CONFIG['APP_DIR'], 'calibrations')
CONFIG['CALIB_DIR']    = os.path.join(CONFIG['BASE_CALIB_DIR'], 'calfiles')
CONFIG['CALIB_DB_DIR']    = os.path.join(CONFIG['BASE_CALIB_DIR'], 'database')
Monica Rainer's avatar
Monica Rainer committed
103
CONFIG['WEBUI_DB_DIR'] = os.path.join(CONFIG['APP_DIR'], 'webuidatabases')
Monica Rainer's avatar
Monica Rainer committed
104

105
106
107
108
109
# Output name

CONFIG['MERGED'] = 's1d' # suffix for merged spectra
CONFIG['UNMERGED'] = 'ms1d' # suffix for unmerged spectra

Monica Rainer's avatar
Monica Rainer committed
110
111
112
113
114
115
#
# Header configuration 
#

# Keywords used by the pipeline: change here if the keywords change
# If some keywords are added or removed, change varie/check_keywords accordingly.
Monica Rainer's avatar
Monica Rainer committed
116
CONFIG['KEYS'] = {'OBJECT' : 'OBJECT', 'OBSTYPE' : 'OBS-TYPE', 'OBSMODE' : 'OBSMODE' , 'IMANAME' : 'IMANAME', 'FILENAME' : 'FILENAME', 'NCOMBINE' : 'NCOMBINE', 'MJD' : 'MJD-OBS', 'EXPTIME' : 'EXPTIME', 'NODSTARE' : 'HIERARCH TNG TPL NAME' , 'GROUPN' : 'GROUP_N', 'GROUPI' : 'GROUP_I', 'SLIT' : 'SLIT_POS' , 'STARE' : 'HIERARCH TNG TPL STAREPOS' , 'GROUPID' : 'HIERARCH TNG TPL GROUPID' , 'ID' : 'HIERARCH TNG TPL OBSID' , 'PID' : 'HIERARCH TNG TPL PAIRID' , 'NPAIRS' : 'HIERARCH TNG TPL NPAIRS' , 'IPAIRS' : 'HIERARCH TNG TPL IPAIRS' ,'NREP' : 'HIERARCH TNG CAT EXP NREP' , 'EXTMODE' : 'HIERARCH TNG CAT DR SPEXTMODE' , 'RA' : 'HIERARCH TNG TEL TARG ALPHA' , 'DEC' : 'HIERARCH TNG TEL TARG DELTA' , 'PMA' : 'HIERARCH TNG TEL TARG PMA' , 'PMD' : 'HIERARCH TNG TEL TARG PMD' , 'EQUINOX' : 'HIERARCH TNG TEL TARG EQUINOX' , 'TARG_TYPE' : 'HIERARCH TNG CAT TARG TYPE' , 'AM' : 'AIRMASS' , 'RADVEL' : 'HIERARCH TNG TEL TARG RADVEL' }
117
118


Monica Rainer's avatar
Monica Rainer committed
119
120
121
122
123
124
125

# Values of the keyword:
# CONFIG['OBSTYPE'] keyword values to determine the nature of the files
CONFIG['DARK'] = 'DARK'
CONFIG['FLAT'] = 'FLAT'
CONFIG['WCAL_UNE'] = 'WCAL_UNE'
CONFIG['WCAL_FP'] = 'WCAL_FP'
Monica Rainer's avatar
Monica Rainer committed
126
#CONFIG['WCAL_FP'] = 'WCAL_LFC'
Monica Rainer's avatar
Monica Rainer committed
127
128
CONFIG['SCIENCE'] = 'SCIENCE'
# CONFIG['NODSTARE'] keyword values to determine if stare or nodding
129
130
131
132
#CONFIG['NODVALUE'] = 'GIANO_sci_nodding'
CONFIG['NODVALUE'] = 'GIANO_obs_nod' # keyword value contains this string
#CONFIG['STAREVALUE'] = 'GIANO_sci_stare'
CONFIG['STAREVALUE'] = 'GIANO_obs_stare' # keyword value contains this string
Monica Rainer's avatar
Monica Rainer committed
133
134
135
136
137
# CONFIG['SLIT'] keyword values to determine the slit position
CONFIG['A'] = 'A' # value of CONFIG['SLIT'] for A position
CONFIG['B'] = 'B' # value of CONFIG['SLIT'] for B position
CONFIG['C'] = 'C' # value of CONFIG['SLIT'] for C position
# CONFIG['STARE'] keyword values to determine the Obj-Sky position
Monica Rainer's avatar
Monica Rainer committed
138
139
CONFIG['OBJ'] = 'Obj'
CONFIG['SKY'] = 'Sky'
140
CONFIG['UNKNOWN'] = 'UNKNOWN'
Monica Rainer's avatar
Monica Rainer committed
141
142
143
# CONFIG['EXTMODE'] keyword values to determine to extraction mode
CONFIG['EXTPAIR'] = 'PAIR_EXT'
CONFIG['EXTAVG'] = 'GRPAVG_EXT'
Monica Rainer's avatar
Monica Rainer committed
144
CONFIG['EXTDEFAULT'] = CONFIG['EXTPAIR']
Monica Rainer's avatar
Monica Rainer committed
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
# CONFIG['TARG_TYPE'] keyword values to determine type of object (science, telluric, ...) 
CONFIG['TELLURIC'] = 'TELLURIC'
CONFIG['FASTROT'] = 'FASTROT'
CONFIG['TYPE_SCIENCE'] = 'SCIENCE'

#
# Keywords added by the DRS, with relative comments
#
CONFIG['KEY_DRS'] = 'HIERARCH TNG DRS'
CONFIG['RON_EFF'] = (' '.join((CONFIG['KEY_DRS'],'RON')),'Effective RON after image reduction')
CONFIG['GAIN_EFF'] = (' '.join((CONFIG['KEY_DRS'],'GAIN')),'Effective gain after image reduction')
CONFIG['TEXP_EFF'] = (' '.join((CONFIG['KEY_DRS'],'EXPTIME')),'Effective exposure time after image reduction')
CONFIG['SPEC_USED'] = (' '.join((CONFIG['KEY_DRS'],'SPEC')),'Images combined')
CONFIG['SPEC_MJD'] = (' '.join((CONFIG['KEY_DRS'],'MJD')),'MJD of the relative image')
CONFIG['SNR'] = (' '.join((CONFIG['KEY_DRS'],'SNR')),'SNR in the middle of the order',)
CONFIG['STRAIGHT_PAR'] = OrderedDict([ ('P1',' '.join((CONFIG['KEY_DRS'],'STR2DP1'))), ('P2',' '.join((CONFIG['KEY_DRS'],'STR2DP2'))), ('P3',' '.join((CONFIG['KEY_DRS'],'STR2DP3'))), ('P4',' '.join((CONFIG['KEY_DRS'],'STR2DP4'))), ('P5',' '.join((CONFIG['KEY_DRS'],'STR2DP5'))), ('P6',' '.join((CONFIG['KEY_DRS'],'STR2DP6'))) ])
Monica Rainer's avatar
Monica Rainer committed
161
CONFIG['DRS_MJD'] = (' '.join((CONFIG['KEY_DRS'],'MJD')),'Mid-exposure MJD of the (combined) image')
Monica Rainer's avatar
Monica Rainer committed
162
CONFIG['BERV'] = (' '.join((CONFIG['KEY_DRS'],'BERV')),'Barycentric correction [km/s]')
Monica Rainer's avatar
Monica Rainer committed
163
164
CONFIG['HJD'] = (' '.join((CONFIG['KEY_DRS'],'HJD')),'Mid-exposure HJD (MJD, UTC) of the (combined) image')
CONFIG['BJD'] = (' '.join((CONFIG['KEY_DRS'],'BJD')),'Mid-exposure BJD (MJD, TDB) of the (combined) image')
Monica Rainer's avatar
Monica Rainer committed
165
CONFIG['AIRMASS'] = (' '.join((CONFIG['KEY_DRS'],'AIRMASS')),'Airmass of the combined image')
166
167
CONFIG['MASTERFLAT'] = (' '.join((CONFIG['KEY_DRS'],'FLAT')),'Flat-field used for the reduction')
CONFIG['MASTERLAMP'] = (' '.join((CONFIG['KEY_DRS'],'LAMP')),'Calibration lamp used for the reduction')
168
CONFIG['KEY_WEXT'] = (' '.join((CONFIG['KEY_DRS'],'WEXT')),'Standard extraction window [pixel]')
Monica Rainer's avatar
Monica Rainer committed
169
CONFIG['DRS_VERSION'] = (' '.join((CONFIG['KEY_DRS'],'VERSION')),'GOFIO version')
Andrea Bignamini's avatar
Andrea Bignamini committed
170
171
172
173
CONFIG['RED'] = (' '.join((CONFIG['KEY_DRS'],'RED')),'GOFIO reduced file')
CONFIG['RED_TYPE'] = (' '.join((CONFIG['KEY_DRS'],'RED TYPE')),'GOFIO reduced file type')
CONFIG['RED_SUBTYPE'] = (' '.join((CONFIG['KEY_DRS'],'RED SUBTYPE')),'GOFIO reduced file subtype')
CONFIG['RED_SLIT'] = (' '.join((CONFIG['KEY_DRS'],'RED SLIT')),'GOFIO reduced file slit')
Monica Rainer's avatar
Monica Rainer committed
174

Monica Rainer's avatar
Monica Rainer committed
175

176
# Wavelength calibration
Monica Rainer's avatar
Monica Rainer committed
177
178
CONFIG['CAL_FUNC'] = {'Oliva':True, 'Poly3':False} # function used for wavelength calibration (Tino Oliva Polynomial or 3-degree polynomial)
#CONFIG['CAL_FUNC'] = {'Oliva':False, 'Poly3':True}
Monica Rainer's avatar
Monica Rainer committed
179
180
CONFIG['CAL_FAILED'] = (' '.join((CONFIG['KEY_DRS'],'CAL ORDER')),'Calibration successful')

181
182
183
184
CONFIG['WLFIT'] = (' '.join((CONFIG['KEY_DRS'],'CAL WLFUNC')),'Function used for wavelength calibration')

if CONFIG['CAL_FUNC']['Oliva']:
    CONFIG['WLFIT_FUNC'] = 'l0 + k1*(x-xc) + k2*(x-xc)**2 + k3*(x-xc)**3'
Monica Rainer's avatar
Monica Rainer committed
185

186
187
188
189
190
else:
    CONFIG['WLFIT_FUNC'] = 'c0 + c1*x + c2*x**2 + c3*x**3'

CONFIG['WLCOEFFS'] = {'k1':(' '.join((CONFIG['KEY_DRS'],'CAL K1')),'k1 coefficient of the calibration function'),'k2':(' '.join((CONFIG['KEY_DRS'],'CAL K2')),'k2 coefficient of the calibration function'),'k3':(' '.join((CONFIG['KEY_DRS'],'CAL K3')),'k3 coefficient of the calibration function'),'l0':(' '.join((CONFIG['KEY_DRS'],'CAL L0')),'l0 coefficient of the calibration function'),'xc':(' '.join((CONFIG['KEY_DRS'],'CAL XC')),'xc coefficient of the calibration function'),'rms':(' '.join((CONFIG['KEY_DRS'],'CAL RMSE')),'[m/s] RMS error of the calibration'), 'c0':(' '.join((CONFIG['KEY_DRS'],'CAL C0')),'c0 coefficient of the calibration function'),'c1':(' '.join((CONFIG['KEY_DRS'],'CAL C1')),'c1 coefficient of the calibration function'),'c2':(' '.join((CONFIG['KEY_DRS'],'CAL C2')),'c2 coefficient of the calibration function'),'c3':(' '.join((CONFIG['KEY_DRS'],'CAL C3')),'c3 coefficient of the calibration function'),'rms_poly':(' '.join((CONFIG['KEY_DRS'],'CAL RMSE')),'[m/s] RMS error of the calibration')}

Monica Rainer's avatar
Monica Rainer committed
191
192
193
194
195
196
197
198
199
200
201
202
203
#
# DB configuration 
#
# Ramp processor database
CONFIG['RAMP_NAME'] = 'ramps' + CONFIG['DATE'] + '.db'
CONFIG['DB_RAMP'] = os.path.join(CONFIG['BASE_RAMP'],CONFIG['RAMP_NAME'])
CONFIG['DB_RAMP_TBL'] = 'reducedramps'
CONFIG['DB_RAMP_COLS'] = {'fpath':'FPATH' , 'obstype':'OBSTYPE' , 'dateobs':'DATEOBS' , 'object' : 'OBJECT' , 'exptime':'EXPTIME' , 'nodstare':'NODSTARE' , 'slitpos':'SLITPOS' , 'groupi':'GROUPI' , 'groupn':'GROUPN'}

# Calibration database
CONFIG['DB_CALIB'] = 'drs_calib.db'
CONFIG['DB_CALIB_PATH'] = os.path.join(CONFIG['CALIB_DB_DIR'], CONFIG['DB_CALIB'])
CONFIG['DB_CALIB_TBL'] = 'calibrations'
Monica Rainer's avatar
Monica Rainer committed
204

205
CONFIG['DB_CALIB_COLS'] = OrderedDict([('01_data', 'date_calib'), ('dark10', 'masterdark10'), ('dark30', 'masterdark30'), ('dark60', 'masterdark60'), ('dark100', 'masterdark100'),  ('dark200', 'masterdark200'), ('dark300', 'masterdark300'), ('dark600', 'masterdark600'),('flat', 'masterflat'), ('flatstr', 'masterflat_str'), ('flatnor', 'masterflat_nor'), ('shiftY', 'shift_Y') ,('une', 'wl_une'), ('une_str', 'wl_une_str'), ('une_calib', 'wl_une_calib'), ('fp', 'wl_fp'), ('fp_str', 'wl_fp_str'), ('fp_calib','wl_fp_calib')])
Monica Rainer's avatar
Monica Rainer committed
206

Monica Rainer's avatar
Monica Rainer committed
207
208
209
210
CONFIG['DB_CALIB_DATATYPE'] = OrderedDict()
for colname in CONFIG['DB_CALIB_COLS']:
    CONFIG['DB_CALIB_DATATYPE'][colname] = 'TEXT' 
CONFIG['DB_CALIB_DATATYPE']['01_data'] = 'TEXT unique'
211
CONFIG['DB_CALIB_DATATYPE']['shiftY'] = 'INTEGER'
Monica Rainer's avatar
Monica Rainer committed
212
213

# Night reduction database
Monica Rainer's avatar
Monica Rainer committed
214
215
216
217
218
219
220
221

CONFIG['DB_ONLINE'] = ''.join(('db_',CONFIG['DATE'],'_online.db'))
CONFIG['DB_OFFLINE'] = ''.join(('db_',CONFIG['DATE'],'_offline.db'))
CONFIG['DB_ONLINE_PATH'] = os.path.join(CONFIG['WEBUI_DB_DIR'], CONFIG['DB_ONLINE'])
CONFIG['DB_OFFLINE_PATH'] = os.path.join(CONFIG['WEBUI_DB_DIR'], CONFIG['DB_OFFLINE'])

CONFIG['DB_2D_TBL'] = 'spec2dfiles'
CONFIG['DB_1D_TBL'] = 'spec1dfiles'
222
CONFIG['DB_CAL_TBL'] = 'calib'
Monica Rainer's avatar
Monica Rainer committed
223
224
225

CONFIG['DB_2D_COLS'] = OrderedDict([('names', 'spec_2d_names'), ('stamp', 'process_timestamp')])
CONFIG['DB_1D_COLS'] = OrderedDict([('path', 'spec_1d_path'), ('stamp', 'process_timestamp'), ('id', 'spec_1d_id'), ('type', 'spec_1d_type'), ('stat', 'arch_stat'), ('name', 'objname'), ('slit', 'slitpos'), ('snry', 'snr1'), ('snrj', 'snr2'), ('snrh', 'snr3'), ('snrk', 'snr4')])
226
CONFIG['DB_CAL_COLS'] = OrderedDict([('type', 'calib_type'), ('names', 'calib_names'), ('status', 'calib_status'), ('stamp', 'process_timestamp')])
Monica Rainer's avatar
Monica Rainer committed
227
228
229

CONFIG['DB_2D_DATATYPE'] = {'names': 'TEXT unique', 'stamp': 'REAL'}
CONFIG['DB_1D_DATATYPE'] = {'path': 'TEXT unique', 'stamp': 'REAL', 'id': 'TEXT', 'type': 'TEXT', 'stat': 'INTEGER', 'name': 'TEXT', 'slit': 'TEXT', 'snry': 'REAL', 'snrj': 'REAL', 'snrh': 'REAL', 'snrk': 'REAL'}
230
CONFIG['DB_CAL_DATATYPE'] = {'type': 'TEXT', 'names': 'TEXT unique', 'status': 'TEXT', 'stamp': 'REAL'}
Monica Rainer's avatar
Monica Rainer committed
231
232
233

CONFIG['DB_NIGHT'] = CONFIG['DB_ONLINE']
CONFIG['DB_NIGHT_PATH'] = CONFIG['DB_ONLINE_PATH']
Monica Rainer's avatar
Monica Rainer committed
234
235
236
237
238
239
240
241
242

#
# Extraction info
#

CONFIG['MASK_C'] = os.path.join(CONFIG['RES_DIR'], 'GIANOB_MASKC.fits')
CONFIG['A_POS'] = 8. # guess pixel position for A
CONFIG['B_POS'] = 23. # guess pixel position for B
CONFIG['C_POS'] = 15. # guess pixel position for C
243
CONFIG['Y_POS'] = 4 # max. pixel difference between expected and real pixel position
Monica Rainer's avatar
Monica Rainer committed
244
CONFIG['HWTM'] = 6. # hwtm limit for contamination between A and B
Monica Rainer's avatar
Monica Rainer committed
245
CONFIG['S1D'] = True # flag for creation of s1d output (True/False)
246
CONFIG['S1D_NORM'] = False # flag for normalization of s1d output (True/False)
247
CONFIG['S1D_STEP'] = 0.001 # constant step to use in s1d spectra
Monica Rainer's avatar
Monica Rainer committed
248
CONFIG['NCOSMIC'] = 20 # NCOSMIC+1 is maximum number of cosmic/outliers to be removed for each orders
Monica Rainer's avatar
Monica Rainer committed
249
250
251
252
253
254
255
256

#
# Wavelength calibration
#

CONFIG['WAVE_SELECT'] = os.path.join(CONFIG['RES_DIR'], 'UNe_lines_GIANO_selected.txt')
CONFIG['WAVE_ALL'] = os.path.join(CONFIG['RES_DIR'], 'UNe_observed_lines_GIANOB_18nov2016.txt')
CONFIG['WAVE_FIT'] = {'drift':0.0, 'low_fwhm':1.7, 'high_fwhm':4.0, 'wrange1':10, 'confidence1':3, 'wrange2':5, 'confidence2':1.5, 'xc_range':10}
Monica Rainer's avatar
Monica Rainer committed
257
#CONFIG['WAVE_FIT'] = {'drift':0.0, 'low_fwhm':0.5, 'high_fwhm':4.0, 'wrange1':10, 'confidence1':3, 'wrange2':5, 'confidence2':2.5, 'xc_range':10}
Monica Rainer's avatar
Monica Rainer committed
258
259
260
261
262
263
264
265
266
CONFIG['XC_GUESS'] = {32:987, 33:984, 34:982, 35:980, 36:978, 37:976, 38:974, 39:972, 40:970, 41:968, 42:965, 43:963, 44:960, 45:957, 46:955, 47:952, 48:949, 49:946, 50:943, 51:940, 52:937, 53:933, 54:930, 55:927, 56:924, 57:921, 58:918, 59:914, 60:910, 61:907, 62:904, 63:901, 64:898, 65:895, 66:892, 67:889, 68:886, 69:883, 70:880, 71:877, 72:874, 73:871, 74:868, 75:865, 76:862, 77:859, 78:857, 79:855, 80:853, 81:851}
CONFIG['L0_GUESS'] = {32:2398.32, 33:2325.63, 34:2257.24, 35:2192.68, 36:2131.75, 37:2074.09, 38:2019.53, 39:1967.73, 40:1918.56, 41:1871.75, 42:1827.18, 43:1784.70, 44:1744.14, 45:1705.38, 46:1668.31, 47:1632.82, 48:1598.81, 49:1566.20, 50:1534.86, 51:1504.78, 52:1475.85, 53:1448.03, 54:1421.20, 55:1395.38, 56:1370.45, 57:1346.41, 58:1323.22, 59:1300.78, 60:1279.12, 61:1258.15, 62:1237.85, 63:1218.21, 64:1199.17, 65:1180.72, 66:1162.83, 67:1145.47, 68:1128.62, 69:1112.26, 70:1096.36, 71:1080.91, 72:1065.89, 73:1051.28, 74:1037.06, 75:1023.22, 76:1003.74, 77:996.61, 78:983.81, 79:971.34, 80:959.17, 81:947.30}

#
# Misc Calibrations
#

CONFIG['DO_CALIB'] = {'dark':True, 'flat':True, 'une':True, 'fp':True, 'only_calib':False}
#CONFIG['DO_CALIB'] = {'dark':False, 'flat':False, 'une':False, 'fp':False, 'only_calib':False}
Monica Rainer's avatar
Monica Rainer committed
267
268
269

CONFIG['USE_FLAT'] = {'global':False, 'order':True, 'nor':False} # global: flat normalized by global mean value - order: flat normalized order by order by mean value - nor: flat normalized row by row by continuum fitting, removing the blaze function - No True value: no flat division

Monica Rainer's avatar
Monica Rainer committed
270
271
272
CONFIG['DARKLIST'] = {10:[],30:[],60:[],100:[],200:[],300:[],600:[]} # exptime dei dark
CONFIG['NDARK'] = len(CONFIG['DARKLIST']) # quanti tipi di dark (esempio: 10,30,60,100 sec = 4) meglio sovrastimare

Monica Rainer's avatar
Monica Rainer committed
273
CONFIG['WEXT'] = 10 # extraction half-window for wavelength calibration, it will extract 2*wext around the center of the order
Monica Rainer's avatar
Monica Rainer committed
274
275

#
276
# Detector info
Monica Rainer's avatar
Monica Rainer committed
277
278
#

Monica Rainer's avatar
Monica Rainer committed
279
280
281
282
CONFIG['RON'] = 5.0 # electrons
CONFIG['GAIN'] = 2.2 # e/ADU
CONFIG['XCCD'] = 2048
CONFIG['YCCD'] = 2048
Monica Rainer's avatar
Monica Rainer committed
283
284
CONFIG['N_ORD'] = 50 # number of echelle orders
CONFIG['W_ORD'] = 41 # width of straighten order in pixel
285
CONFIG['SHIFT_Y'] = 20 # expected bottom position of flat signal on the lowest order and the left side of the detector. DO NOT CHANGE.
Monica Rainer's avatar
Monica Rainer committed
286
287
288
289
290

#
# Quality checks
#

Monica Rainer's avatar
Monica Rainer committed
291
CONFIG['DARK_MEAN'] = {10:[10.0,10.0,10.0,10.0], 30:[25.0,25.0,25.0,25.0], 60:[50.0,50.0,50.0,50.0], 100:[80.0,80.0,80.0,80.0], 200:[800.0,800.0,800.0,800.0], 300:[800.0,800.0,800.0,800.0], 600:[800.0,800.0,800.0,800.0]} # Dark quality check: mean signal below this number (4 quadrant for 7 exposure time)
Monica Rainer's avatar
Monica Rainer committed
292
CONFIG['FLATSIGNAL'] = 2000 # lowest flat signal expected to pass quality check
Monica Rainer's avatar
Monica Rainer committed
293
294
295
296
297
CONFIG['SCIENCECHECK'] = [500,540,140,160] # region x1:x2,y1:y2 for images' quality check
#CONFIG['NODSIGNAL'] = 2*CONFIG['DARK_MEAN']['quadrant'][0] # lowest image signal expected to pass quality check
CONFIG['NODSIGNAL'] = 0.0 # lowest image signal expected to pass quality check


Monica Rainer's avatar
Monica Rainer committed
298
# radial velocity computation configuration
Unknown's avatar
Unknown committed
299
# TO DO
Monica Rainer's avatar
Monica Rainer committed
300

Monica Rainer's avatar
Monica Rainer committed
301

Monica Rainer's avatar
Monica Rainer committed
302
303
304
#if USRCONFIG['OFFLINE']:
#    for key in USRCONFIG.keys():
#        CONFIG[key] = USRCONFIG[key]
Monica Rainer's avatar
Monica Rainer committed
305

Monica Rainer's avatar
Monica Rainer committed
306
307
308
309
310
311
312
313
#    CONFIG['RAW_DIR'] = os.path.join(CONFIG['BASE_RAW'],CONFIG['DATE'])
#    CONFIG['OFFLINE_DIR'] = os.path.join(CONFIG['BASE_RED_DIR'],CONFIG['DATE'])
#    CONFIG['RED_DIR'] = os.path.join(CONFIG['OFFLINE_DIR'],'offline')
#    CONFIG['RED_CALIB'] = os.path.join(CONFIG['RED_DIR'],'CALIB')
#    CONFIG['RED_STR'] = os.path.join(CONFIG['RED_DIR'],'STR')
#    CONFIG['LOG_FILE'] = os.path.join(CONFIG['RED_DIR'], 'drs.log')
#    CONFIG['RAMP_NAME'] = 'ramps' + CONFIG['DATE'] + '.db'
#    CONFIG['DB_RAMP'] = os.path.join(CONFIG['BASE_RAMP'],CONFIG['RAMP_NAME'])
Monica Rainer's avatar
Monica Rainer committed
314

Monica Rainer's avatar
Monica Rainer committed
315
316
317
318
#    CONFIG['DB_OFFLINE'] = ''.join(('db_',CONFIG['DATE'],'_offline.db'))
#    CONFIG['DB_OFFLINE_PATH'] = os.path.join(CONFIG['WEBUI_DB_DIR'], CONFIG['DB_OFFLINE'])
#    CONFIG['DB_NIGHT'] = CONFIG['DB_OFFLINE']
#    CONFIG['DB_NIGHT_PATH'] = CONFIG['DB_OFFLINE_PATH']
Monica Rainer's avatar
Monica Rainer committed
319

Monica Rainer's avatar
Monica Rainer committed
320
321
#    maskc = ''.join(('GIANOB_MASKC_',CONFIG['DATE'],'.fits'))
#    CONFIG['MASK_C'] = os.path.join(CONFIG['RES_DIR'], maskc)
Monica Rainer's avatar
Monica Rainer committed
322

Monica Rainer's avatar
Monica Rainer committed
323